2p
|
two photon (two_photon) |
technique
|
|
3p
|
two photon (two_photon) |
technique
|
|
405
|
wavelength (wavelength) |
channel
|
|
488
|
wavelength (wavelength) |
channel
|
|
561
|
wavelength (wavelength) |
channel
|
|
594
|
wavelength (wavelength) |
channel
|
|
640
|
wavelength (wavelength) |
channel
|
|
647
|
wavelength (wavelength) |
channel
|
|
acceptor_photobleach
|
energy transfer (energy_transfer) |
technique
|
|
activecontour
|
segmentation method (segmentation_method) |
technique
|
|
afm
|
atomic force microscopy (atomic_force_microscopy) |
technique
|
|
air
|
immersion (immersion) |
technique
|
|
airy-scan
|
airyscan (airyscan) |
technique
|
|
airy_units
|
pinhole (pinhole) |
technique
|
|
airyscan
|
airyscan (airyscan) |
technique
|
|
alexa
|
synthetic dye (synthetic_dye) |
reagent
|
|
annexin
|
viability stain (viability_stain) |
reagent
|
|
apotome
|
structured illumination (structured_illumination) |
technique
|
|
area_measure
|
intensity measure (intensity_measure) |
technique
|
|
aspectratio
|
intensity measure (intensity_measure) |
technique
|
|
atto
|
synthetic dye (synthetic_dye) |
reagent
|
|
au_pinhole
|
pinhole (pinhole) |
technique
|
|
avgproj
|
maximum projection (maximum_projection) |
technique
|
|
background-subtracted
|
background subtraction (background_subtraction) |
technique
|
|
bbox
|
region of interest (region_of_interest) |
acquisition
|
|
bf
|
brightfield (brightfield) |
technique
|
|
bfp
|
fluorescent protein (fluorescent_protein) |
reagent
|
|
bgsub
|
background subtraction (background_subtraction) |
technique
|
|
bin1
|
binning (binning) |
technique
|
|
bin2
|
binning (binning) |
technique
|
|
bin4
|
binning (binning) |
technique
|
|
binning
|
binning (binning) |
technique
|
also spelled by binned (stage) |
bisbenzimide
|
nuclear stain (nuclear_stain) |
reagent
|
|
bleach-corrected
|
bleach correction (bleach_correction) |
technique
|
|
bleachcorrect
|
bleach correction (bleach_correction) |
technique
|
|
blinddecon
|
deconvolution method (deconvolution_method) |
technique
|
|
bodipy
|
synthetic dye (synthetic_dye) |
reagent
|
|
bounding_box
|
region of interest (region_of_interest) |
acquisition
|
|
brdu
|
viability stain (viability_stain) |
reagent
|
|
bret
|
energy transfer (energy_transfer) |
technique
|
|
bright-field
|
brightfield (brightfield) |
technique
|
|
brightfield
|
brightfield (brightfield) |
technique
|
|
btrack
|
tracking method (tracking_method) |
technique
|
|
c0
|
channel (channel) |
channel
|
|
c1
|
channel (channel) |
channel
|
|
c2
|
channel (channel) |
channel
|
|
c3
|
channel (channel) |
channel
|
|
c4
|
channel (channel) |
channel
|
|
ca_imaging
|
calcium imaging (calcium_imaging) |
technique
|
|
cal-520
|
calcium imaging (calcium_imaging) |
technique
|
|
calcein
|
viability stain (viability_stain) |
reagent
|
|
calcium imaging
|
calcium imaging (calcium_imaging) |
technique
|
|
ccp4
|
electron density map (em_density_format) |
format
|
|
cellmask
|
organelle tracker (organelle_tracker) |
reagent
|
|
cellpose
|
segmentation method (segmentation_method) |
technique
|
|
cerulean
|
fluorescent protein (fluorescent_protein) |
reagent
|
|
cf_dye
|
synthetic dye (synthetic_dye) |
reagent
|
|
cfp
|
fluorescent protein (fluorescent_protein) |
reagent
|
|
ch
|
channel (channel) |
channel
|
|
chan
|
channel (channel) |
channel
|
|
channel
|
channel (channel) |
channel
|
|
circularity
|
intensity measure (intensity_measure) |
technique
|
|
citrine
|
fluorescent protein (fluorescent_protein) |
reagent
|
|
clem
|
correlative (correlative) |
technique
|
|
clip
|
fluorescent protein (fluorescent_protein) |
reagent
|
also spelled by movie (file_role) |
clsm
|
confocal (confocal) |
technique
|
|
coloc
|
colocalisation (colocalisation) |
technique
|
|
colocalisation
|
colocalisation (colocalisation) |
technique
|
|
colocalization
|
colocalisation (colocalisation) |
technique
|
|
confocal
|
confocal (confocal) |
technique
|
|
coo
|
MitoGraph output (mitograph_output) |
format
|
read only as a file extension, after a dot |
correlative
|
correlative (correlative) |
technique
|
|
correlative-light-electron
|
correlative (correlative) |
technique
|
|
coumarin
|
synthetic dye (synthetic_dye) |
reagent
|
|
cryo serial fib
|
CryoFIB (cryo_focused_ion_beam) |
technique
|
|
cryo-clem
|
CryoCLEM (cryo_correlative) |
technique
|
|
cryo-correlative
|
CryoCLEM (cryo_correlative) |
technique
|
|
cryo-electron
|
CryoEM (cryo_electron_microscopy) |
technique
|
|
cryo-electron microscope
|
CryoEM (cryo_electron_microscopy) |
technique
|
|
cryo-electron microscopy
|
CryoEM (cryo_electron_microscopy) |
technique
|
|
cryo-electron tomogram
|
CryoET (cryo_electron_tomography) |
technique
|
|
cryo-electron tomographic
|
CryoET (cryo_electron_tomography) |
technique
|
|
cryo-electron tomography
|
CryoET (cryo_electron_tomography) |
technique
|
|
cryo-em
|
CryoEM (cryo_electron_microscopy) |
technique
|
|
cryo-et
|
CryoET (cryo_electron_tomography) |
technique
|
|
cryo-fib
|
CryoFIB (cryo_focused_ion_beam) |
technique
|
|
cryo-fib-sem
|
CryoFIB (cryo_focused_ion_beam) |
technique
|
|
cryo-fib-sem serial
|
CryoFIB (cryo_focused_ion_beam) |
technique
|
|
cryo-micrograph
|
CryoEM (cryo_electron_microscopy) |
technique
|
|
cryo-pfib
|
CryoFIB (cryo_focused_ion_beam) |
technique
|
|
cryo-plasma-fib
|
CryoFIB (cryo_focused_ion_beam) |
technique
|
|
cryo-sem
|
CryoEM (cryo_electron_microscopy) |
technique
|
|
cryo-soft x-ray
|
X-ray tomography (x_ray_tomography) |
technique
|
|
cryo-soft x-ray tomography
|
X-ray tomography (x_ray_tomography) |
technique
|
|
cryo-sxt
|
X-ray tomography (x_ray_tomography) |
technique
|
|
cryo-tem
|
CryoEM (cryo_electron_microscopy) |
technique
|
|
cryo-tomogram
|
CryoET (cryo_electron_tomography) |
technique
|
|
cryo-tomography
|
CryoET (cryo_electron_tomography) |
technique
|
|
cryo-transmission electron microscopy
|
CryoEM (cryo_electron_microscopy) |
technique
|
|
cryo-transmission electron tomogram
|
CryoET (cryo_electron_tomography) |
technique
|
|
cryo-transmission electron tomography
|
CryoET (cryo_electron_tomography) |
technique
|
|
cryoem
|
CryoEM (cryo_electron_microscopy) |
technique
|
|
cryogenic electron microscopy
|
CryoEM (cryo_electron_microscopy) |
technique
|
|
cryogenic electron tomogram
|
CryoET (cryo_electron_tomography) |
technique
|
|
cryogenic electron tomograph
|
CryoET (cryo_electron_tomography) |
technique
|
|
cryogenic electron tomography
|
CryoET (cryo_electron_tomography) |
technique
|
|
cryogenic-em
|
CryoEM (cryo_electron_microscopy) |
technique
|
|
csu
|
spinning disk (spinning_disk) |
technique
|
|
cy2
|
synthetic dye (synthetic_dye) |
reagent
|
|
cy3
|
synthetic dye (synthetic_dye) |
reagent
|
|
cy5
|
synthetic dye (synthetic_dye) |
reagent
|
|
cy7
|
synthetic dye (synthetic_dye) |
reagent
|
|
cz
|
Zeiss ZEN graphics export (zeiss_zen_graphics) |
format
|
read only as a file extension, after a dot |
dapi
|
nuclear stain (nuclear_stain) |
reagent
|
|
dark-field
|
darkfield (darkfield) |
technique
|
|
darkfield
|
darkfield (darkfield) |
technique
|
|
df
|
darkfield (darkfield) |
technique
|
|
dic
|
differential interference contrast (differential_interference_contrast) |
technique
|
|
diffusion
|
single particle tracking (single_particle_tracking) |
technique
|
|
dnapaint
|
single molecule localisation (single_molecule_localisation) |
technique
|
|
draq5
|
nuclear stain (nuclear_stain) |
reagent
|
|
drift-corrected
|
drift correction (drift_correction) |
technique
|
|
driftcorrect
|
drift correction (drift_correction) |
technique
|
|
dry
|
immersion (immersion) |
technique
|
|
dslm
|
light sheet (light_sheet) |
technique
|
|
dsred
|
fluorescent protein (fluorescent_protein) |
reagent
|
|
dstorm
|
single molecule localisation (single_molecule_localisation) |
technique
|
|
dwell
|
exposure (exposure) |
technique
|
|
dwelltime
|
exposure (exposure) |
technique
|
|
dylight
|
synthetic dye (synthetic_dye) |
reagent
|
|
edu
|
viability stain (viability_stain) |
reagent
|
|
egfp
|
fluorescent protein (fluorescent_protein) |
reagent
|
|
electron cryo-microscopy
|
CryoEM (cryo_electron_microscopy) |
technique
|
|
electron cryo-tomography
|
CryoET (cryo_electron_tomography) |
technique
|
|
electron microscope
|
electron microscopy (electron_microscopy) |
technique
|
|
electron microscopy
|
electron microscopy (electron_microscopy) |
technique
|
|
electron tomography
|
electron microscopy (electron_microscopy) |
technique
|
|
em
|
electron microscopy (electron_microscopy); wavelength (wavelength) |
channel, technique
|
also spelled by wavelength (channel); also spelled by electron microscopy (technique) |
em-gain
|
gain (gain) |
technique
|
|
emgain
|
gain (gain) |
technique
|
|
emission
|
wavelength (wavelength) |
channel
|
|
epi
|
epifluorescence (epifluorescence) |
technique
|
|
epifluorescence
|
epifluorescence (epifluorescence) |
technique
|
|
er tracker
|
organelle tracker (organelle_tracker) |
reagent
|
|
ertracker
|
organelle tracker (organelle_tracker) |
reagent
|
|
ex
|
wavelength (wavelength) |
channel
|
|
excitation
|
wavelength (wavelength) |
channel
|
|
exm
|
expansion microscopy (expansion_microscopy) |
technique
|
|
exp_time
|
exposure (exposure) |
technique
|
|
expansion
|
expansion microscopy (expansion_microscopy) |
technique
|
|
expansion-microscopy
|
expansion microscopy (expansion_microscopy) |
technique
|
|
exposure
|
exposure (exposure) |
technique
|
|
fccs
|
correlation spectroscopy (correlation_spectroscopy) |
technique
|
|
fcs
|
correlation spectroscopy (correlation_spectroscopy) |
technique
|
also spelled by flow cytometry data (format), supplement (reagent) |
feret
|
intensity measure (intensity_measure) |
technique
|
|
ffc
|
flat field (flat_field) |
technique
|
|
fib-sem
|
electron microscopy (electron_microscopy) |
technique
|
|
fibsem
|
electron microscopy (electron_microscopy) |
technique
|
|
field
|
field of view (field_of_view) |
acquisition
|
|
fiji_roi_zip
|
Fiji ROI archive (fiji_roi_zip) |
format
|
read only as a file extension, after a dot |
fitc
|
synthetic dye (synthetic_dye) |
reagent
|
|
flat-field
|
flat field (flat_field) |
technique
|
|
flatfield
|
flat field (flat_field) |
technique
|
|
flim
|
fluorescence lifetime (fluorescence_lifetime) |
technique
|
|
flip
|
photobleaching recovery (photobleaching_recovery) |
technique
|
|
fluo
|
epifluorescence (epifluorescence) |
technique
|
|
fluo-3
|
calcium imaging (calcium_imaging) |
technique
|
|
fluo-4
|
calcium imaging (calcium_imaging) |
technique
|
|
fluorescence
|
epifluorescence (epifluorescence) |
technique
|
|
fluorescence microscopy
|
epifluorescence (epifluorescence) |
technique
|
|
fluorescence recovery after photobleaching
|
photobleaching recovery (photobleaching_recovery) |
technique
|
|
fluorescence_recovery
|
photobleaching recovery (photobleaching_recovery) |
technique
|
|
fov
|
field of view (field_of_view) |
acquisition
|
also spelled by position (position) |
frame_area
|
field of view (field_of_view) |
acquisition
|
|
frap
|
photobleaching recovery (photobleaching_recovery) |
technique
|
|
fret
|
energy transfer (energy_transfer) |
technique
|
|
fura_style
|
ratiometric (ratiometric) |
technique
|
|
gain
|
gain (gain) |
technique
|
|
gcamp
|
calcium imaging (calcium_imaging) |
technique
|
|
gcamp6
|
calcium imaging (calcium_imaging) |
technique
|
|
gcamp6f
|
calcium imaging (calcium_imaging) |
technique
|
|
gcamp6m
|
calcium imaging (calcium_imaging) |
technique
|
|
gcamp6s
|
calcium imaging (calcium_imaging) |
technique
|
|
gcamp_class
|
calcium imaging (calcium_imaging) |
technique
|
|
gfp
|
fluorescent protein (fluorescent_protein) |
reagent
|
|
glycerol
|
immersion (immersion) |
technique
|
|
gnet
|
MitoGraph output (mitograph_output) |
format
|
read only as a file extension, after a dot |
golgi_stain
|
organelle tracker (organelle_tracker) |
reagent
|
|
grid_scan
|
tile (tile) |
acquisition
|
|
halo
|
fluorescent protein (fluorescent_protein) |
reagent
|
|
halo tag
|
fluorescent protein (fluorescent_protein) |
reagent
|
|
highly inclined and laminated optical sheet
|
HILO (highly_inclined_illumination) |
technique
|
|
highly inclined thin illumination
|
HILO (highly_inclined_illumination) |
technique
|
|
hilo
|
HILO (highly_inclined_illumination) |
technique
|
|
hoechst
|
nuclear stain (nuclear_stain) |
reagent
|
|
hoechst 33258
|
nuclear stain (nuclear_stain) |
reagent
|
|
hoechst 33342
|
nuclear stain (nuclear_stain) |
reagent
|
|
huygens_style
|
deconvolution method (deconvolution_method) |
technique
|
|
if_stain
|
immunolabel (immunolabel) |
reagent
|
|
ihc
|
immunolabel (immunolabel) |
reagent
|
|
ilastik
|
segmentation method (segmentation_method) |
technique
|
|
illumination_correction
|
flat field (flat_field) |
technique
|
|
image-stack
|
image stack (image_stack) |
acquisition
|
|
imagestack
|
image stack (image_stack) |
acquisition
|
|
immersion
|
immersion (immersion) |
technique
|
|
immunofluorescence
|
immunolabel (immunolabel) |
reagent
|
|
immunohistochemistry
|
immunolabel (immunolabel) |
reagent
|
|
immunostain
|
immunolabel (immunolabel) |
reagent
|
|
intden
|
intensity measure (intensity_measure) |
technique
|
|
integrateddensity
|
intensity measure (intensity_measure) |
technique
|
|
integration_time
|
exposure (exposure) |
technique
|
|
intensities
|
intensity measure (intensity_measure) |
technique
|
|
intensity
|
intensity measure (intensity_measure) |
technique
|
|
intensity_setting
|
laser power (laser_power) |
technique
|
|
isim
|
airyscan (airyscan) |
technique
|
|
iso
|
gain (gain) |
technique
|
|
janelia_fluor
|
synthetic dye (synthetic_dye) |
reagent
|
|
jf
|
synthetic dye (synthetic_dye) |
reagent
|
|
jgcamp7
|
calcium imaging (calcium_imaging) |
technique
|
|
jgcamp8
|
calcium imaging (calcium_imaging) |
technique
|
|
kalman
|
tracking method (tracking_method) |
technique
|
|
lap_tracker
|
tracking method (tracking_method) |
technique
|
|
laser-power
|
laser power (laser_power) |
technique
|
|
laserpower
|
laser power (laser_power) |
technique
|
|
lattice-light-sheet
|
light sheet (light_sheet) |
technique
|
|
li_ica
|
colocalisation (colocalisation) |
technique
|
|
lifetime
|
fluorescence lifetime (fluorescence_lifetime) |
technique
|
|
light microscopy
|
light microscopy (light_microscopy) |
technique
|
|
light-sheet
|
light sheet (light_sheet) |
technique
|
|
lightsheet
|
light sheet (light_sheet) |
technique
|
|
linking
|
tracking method (tracking_method) |
technique
|
|
live-dead
|
viability stain (viability_stain) |
reagent
|
|
live_dead
|
viability stain (viability_stain) |
reagent
|
|
lls
|
light sheet (light_sheet) |
technique
|
|
lsfm
|
light sheet (light_sheet) |
technique
|
|
lsm
|
confocal (confocal) |
technique
|
also spelled by image format (format) |
lucy
|
deconvolution method (deconvolution_method) |
technique
|
|
lyso tracker
|
organelle tracker (organelle_tracker) |
reagent
|
|
lysotracker
|
organelle tracker (organelle_tracker) |
reagent
|
|
manders
|
colocalisation (colocalisation) |
technique
|
|
max-projection
|
maximum projection (maximum_projection) |
technique
|
|
maximum_intensity
|
maximum projection (maximum_projection) |
technique
|
|
maxproj
|
maximum projection (maximum_projection) |
technique
|
|
maxz
|
maximum projection (maximum_projection) |
technique
|
|
mcherry
|
fluorescent protein (fluorescent_protein) |
reagent
|
|
mean-squared-displacement
|
single particle tracking (single_particle_tracking) |
technique
|
|
meanintensity
|
intensity measure (intensity_measure) |
technique
|
|
megfp
|
fluorescent protein (fluorescent_protein) |
reagent
|
|
membrane_dye
|
organelle tracker (organelle_tracker) |
reagent
|
|
micro-ct
|
X-ray tomography (x_ray_tomography) |
technique
|
|
mip
|
maximum projection (maximum_projection) |
technique
|
|
mito tracker
|
organelle tracker (organelle_tracker) |
reagent
|
|
mitograph
|
MitoGraph output (mitograph_output) |
format
|
read only as a file extension, after a dot |
mitotracker
|
organelle tracker (organelle_tracker) |
reagent
|
|
mkate
|
fluorescent protein (fluorescent_protein) |
reagent
|
|
mneongreen
|
fluorescent protein (fluorescent_protein) |
reagent
|
|
montage
|
tile (tile) |
acquisition
|
|
mosaic
|
tile (tile) |
acquisition
|
also spelled by stitched (stage) |
movie_series
|
time series (time_series) |
acquisition
|
|
mp
|
two photon (two_photon) |
technique
|
also spelled by mass photometry data (format) |
mrc
|
electron density map (em_density_format) |
format
|
|
mscarlet
|
fluorescent protein (fluorescent_protein) |
reagent
|
|
msd
|
single particle tracking (single_particle_tracking) |
technique
|
|
mturquoise
|
fluorescent protein (fluorescent_protein) |
reagent
|
|
multi-immersion
|
immersion (immersion) |
technique
|
|
multiphoton
|
two photon (two_photon) |
technique
|
|
multipoint
|
multipoint (multipoint) |
acquisition
|
|
n&b
|
correlation spectroscopy (correlation_spectroscopy) |
technique
|
|
nm_line
|
wavelength (wavelength) |
channel
|
|
nomarski
|
differential interference contrast (differential_interference_contrast) |
technique
|
|
numberandbrightness
|
correlation spectroscopy (correlation_spectroscopy) |
technique
|
|
offset_gain
|
gain (gain) |
technique
|
|
oil
|
immersion (immersion) |
technique
|
|
optical_section
|
z stack (z_stack) |
acquisition
|
|
optogenetic_stim
|
photoactivation (photoactivation) |
technique
|
|
ortho
|
orthogonal view (orthogonal_view) |
technique
|
|
orthogonal
|
orthogonal view (orthogonal_view) |
technique
|
|
otsu
|
segmentation method (segmentation_method) |
technique
|
|
ovl
|
Zeiss LSM overlay (zeiss_lsm_overlay) |
format
|
|
paGFP_class
|
photoactivation (photoactivation) |
technique
|
|
paint
|
single molecule localisation (single_molecule_localisation) |
technique
|
|
palm
|
single molecule localisation (single_molecule_localisation) |
technique
|
|
pearson_coloc
|
colocalisation (colocalisation) |
technique
|
|
percent_power
|
laser power (laser_power) |
technique
|
|
pericam_style
|
ratiometric (ratiometric) |
technique
|
|
perimeter
|
intensity measure (intensity_measure) |
technique
|
|
ph
|
phase contrast (phase_contrast) |
technique
|
|
ph1
|
phase contrast (phase_contrast) |
technique
|
|
ph2
|
phase contrast (phase_contrast) |
technique
|
|
ph3
|
phase contrast (phase_contrast) |
technique
|
|
phalloidin
|
organelle tracker (organelle_tracker) |
reagent
|
|
phase
|
phase contrast (phase_contrast) |
technique
|
|
phase plate
|
phase plate (phase_plate) |
technique
|
|
phase-contrast
|
phase contrast (phase_contrast) |
technique
|
|
phasecontrast
|
phase contrast (phase_contrast) |
technique
|
|
photoactivation
|
photoactivation (photoactivation) |
technique
|
|
photobleach_correction
|
bleach correction (bleach_correction) |
technique
|
|
photoconversion
|
photoactivation (photoactivation) |
technique
|
|
pi_stain
|
nuclear stain (nuclear_stain) |
reagent
|
|
pinhole
|
pinhole (pinhole) |
technique
|
|
pixel-size
|
pixel size (pixel_size) |
technique
|
|
pixelsize
|
pixel size (pixel_size) |
technique
|
|
plane
|
z stack (z_stack) |
acquisition
|
|
planes
|
z stack (z_stack) |
acquisition
|
|
point-scanning
|
confocal (confocal) |
technique
|
|
pointscanning
|
confocal (confocal) |
technique
|
|
positions
|
multipoint (multipoint) |
acquisition
|
also spelled by position (position) |
power
|
laser power (laser_power) |
technique
|
|
primary_ab
|
immunolabel (immunolabel) |
reagent
|
|
propidium
|
nuclear stain (nuclear_stain) |
reagent
|
|
qdot
|
quantum dot (quantum_dot) |
reagent
|
|
quantum dot
|
quantum dot (quantum_dot) |
reagent
|
|
ratio_imaging
|
ratiometric (ratiometric) |
technique
|
|
ratiometric
|
ratiometric (ratiometric) |
technique
|
|
rawintden
|
intensity measure (intensity_measure) |
technique
|
|
region
|
region of interest (region_of_interest) |
acquisition
|
|
regions
|
region of interest (region_of_interest) |
acquisition
|
|
registration_drift
|
drift correction (drift_correction) |
technique
|
|
rescan
|
airyscan (airyscan) |
technique
|
|
reslice
|
orthogonal view (orthogonal_view) |
technique
|
|
resliced
|
orthogonal view (orthogonal_view) |
technique
|
|
resolft
|
stimulated emission depletion (stimulated_emission_depletion) |
technique
|
|
rfp
|
fluorescent protein (fluorescent_protein) |
reagent
|
|
rhodamine
|
synthetic dye (synthetic_dye) |
reagent
|
|
richardson
|
deconvolution method (deconvolution_method) |
technique
|
|
rics
|
correlation spectroscopy (correlation_spectroscopy) |
technique
|
|
rl_decon
|
deconvolution method (deconvolution_method) |
technique
|
|
roi
|
ImageJ region of interest (imagej_roi); region of interest (region_of_interest) |
acquisition, format
|
read only as a file extension, after a dot; also spelled by annotation (file_role), region of interest (acquisition); also spelled by ImageJ region of interest (format), annotation (file_role) |
rois
|
region of interest (region_of_interest) |
acquisition
|
also spelled by annotation (file_role) |
rolling-ball
|
background subtraction (background_subtraction) |
technique
|
|
rollingball
|
background subtraction (background_subtraction) |
technique
|
|
routine
|
EVOS acquisition record (evos_acquisition) |
format
|
read only as a file extension, after a dot |
sbfsem
|
electron microscopy (electron_microscopy) |
technique
|
|
scanning electron microscopy
|
electron microscopy (electron_microscopy) |
technique
|
|
scanningprobe
|
atomic force microscopy (atomic_force_microscopy) |
technique
|
|
sd
|
spinning disk (spinning_disk) |
technique
|
also spelled by standard deviation (statistic) |
secondary_ab
|
immunolabel (immunolabel) |
reagent
|
|
section
|
z stack (z_stack) |
acquisition
|
|
sem
|
electron microscopy (electron_microscopy) |
technique
|
also spelled by standard error (statistic) |
sensitised_emission
|
energy transfer (energy_transfer) |
technique
|
|
sfgfp
|
fluorescent protein (fluorescent_protein) |
reagent
|
|
shading
|
flat field (flat_field) |
technique
|
|
shadingcorrection
|
flat field (flat_field) |
technique
|
|
silicone
|
immersion (immersion) |
technique
|
|
sim
|
structured illumination (structured_illumination) |
technique
|
declared ambiguous with simulation (technique) |
single molecule tracking
|
single particle tracking (single_particle_tracking) |
technique
|
|
single particle
|
single particle (single_particle) |
technique
|
|
single particle tracking
|
single particle tracking (single_particle_tracking) |
technique
|
|
single-molecule localisation
|
single molecule localisation (single_molecule_localisation) |
technique
|
|
single-molecule localisation microscopy
|
single molecule localisation (single_molecule_localisation) |
technique
|
|
single-molecule localization
|
single molecule localisation (single_molecule_localisation) |
technique
|
|
single-molecule localization microscopy
|
single molecule localisation (single_molecule_localisation) |
technique
|
|
sites
|
multipoint (multipoint) |
acquisition
|
also spelled by position (position) |
skeleton
|
skeletonised shape (skeleton) |
technique
|
|
skeletonised
|
skeletonised shape (skeleton) |
technique
|
|
skeletonized
|
skeletonised shape (skeleton) |
technique
|
|
skeletons
|
skeletonised shape (skeleton) |
technique
|
|
slice
|
z stack (z_stack) |
acquisition
|
|
slices
|
z stack (z_stack) |
acquisition
|
|
smlm
|
single molecule localisation (single_molecule_localisation) |
technique
|
|
smt
|
single particle tracking (single_particle_tracking) |
technique
|
|
snap
|
fluorescent protein (fluorescent_protein) |
reagent
|
|
soft x-ray tomography
|
X-ray tomography (x_ray_tomography) |
technique
|
|
spim
|
light sheet (light_sheet) |
technique
|
|
spinning-disk
|
spinning disk (spinning_disk) |
technique
|
|
spinningdisk
|
spinning disk (spinning_disk) |
technique
|
|
spt
|
single particle tracking (single_particle_tracking) |
technique
|
|
stabilised
|
drift correction (drift_correction) |
technique
|
|
stabilized
|
drift correction (drift_correction) |
technique
|
|
stack
|
image stack (image_stack) |
acquisition
|
|
stacks
|
image stack (image_stack) |
acquisition
|
|
stagepositions
|
multipoint (multipoint) |
acquisition
|
|
stardist
|
segmentation method (segmentation_method) |
technique
|
|
stdproj
|
maximum projection (maximum_projection) |
technique
|
|
sted
|
stimulated emission depletion (stimulated_emission_depletion) |
technique
|
|
stepsize
|
pixel size (pixel_size) |
technique
|
|
stitchset
|
tile (tile) |
acquisition
|
|
storm
|
single molecule localisation (single_molecule_localisation) |
technique
|
|
structured-illumination
|
structured illumination (structured_illumination) |
technique
|
|
sumproj
|
maximum projection (maximum_projection) |
technique
|
|
sxt
|
X-ray tomography (x_ray_tomography) |
technique
|
|
sytox
|
nuclear stain (nuclear_stain) |
reagent
|
|
t
|
time series (time_series) |
acquisition
|
|
tcspc
|
fluorescence lifetime (fluorescence_lifetime) |
technique
|
|
tdtomato
|
fluorescent protein (fluorescent_protein) |
reagent
|
|
tem
|
transmission electron microscopy (transmission_electron_microscopy) |
technique
|
|
test
|
trial acquisition (trial_acquisition) |
acquisition
|
also spelled by cross validation (statistic) |
tetramethylrhodamine
|
synthetic dye (synthetic_dye) |
reagent
|
|
texas-red
|
synthetic dye (synthetic_dye) |
reagent
|
|
texasred
|
synthetic dye (synthetic_dye) |
reagent
|
|
threshold_seg
|
segmentation method (segmentation_method) |
technique
|
|
tile
|
tile (tile) |
acquisition
|
|
tiled
|
tile (tile) |
acquisition
|
|
tiles
|
tile (tile) |
acquisition
|
|
time-lapse
|
image stack (image_stack) |
acquisition
|
|
time_lapse
|
image stack (image_stack) |
acquisition
|
|
timelapse
|
EVOS acquisition record (evos_acquisition); image stack (image_stack) |
acquisition, format
|
read only as a file extension, after a dot; also spelled by image stack (acquisition); also spelled by EVOS acquisition record (format) |
timeseries
|
time series (time_series) |
acquisition
|
also spelled by timepoint (timepoint) |
tirf
|
total internal reflection (total_internal_reflection) |
technique
|
|
tirfm
|
total internal reflection (total_internal_reflection) |
technique
|
|
tmr
|
synthetic dye (synthetic_dye) |
reagent
|
|
todo3
|
nuclear stain (nuclear_stain) |
reagent
|
|
tomography
|
electron microscopy (electron_microscopy) |
technique
|
|
tophat
|
background subtraction (background_subtraction) |
technique
|
declared ambiguous with alignment (technique) |
tp
|
time series (time_series) |
acquisition
|
also spelled by confusion matrix (statistic), timepoint (timepoint) |
tracking
|
single particle tracking (single_particle_tracking) |
technique
|
also spelled by analysis (stage) |
trackpy
|
tracking method (tracking_method) |
technique
|
|
trajectories
|
single particle tracking (single_particle_tracking) |
technique
|
also spelled by analysis (stage) |
trans
|
brightfield (brightfield) |
technique
|
|
transients
|
calcium imaging (calcium_imaging) |
technique
|
|
transmission electron microscope
|
transmission electron microscopy (transmission_electron_microscopy) |
technique
|
|
transmission electron microscopy
|
transmission electron microscopy (transmission_electron_microscopy) |
technique
|
|
transmission-em
|
transmission electron microscopy (transmission_electron_microscopy) |
technique
|
|
transmitted
|
brightfield (brightfield) |
technique
|
|
tritc
|
synthetic dye (synthetic_dye) |
reagent
|
|
trypanblue
|
viability stain (viability_stain) |
reagent
|
|
tunel
|
viability stain (viability_stain) |
reagent
|
|
two-photon
|
two photon (two_photon) |
technique
|
|
twophoton
|
two photon (two_photon) |
technique
|
|
unet
|
segmentation method (segmentation_method) |
technique
|
|
venus
|
fluorescent protein (fluorescent_protein) |
reagent
|
|
view
|
field of view (field_of_view) |
acquisition
|
|
voxelsize
|
pixel size (pixel_size) |
technique
|
|
w1
|
channel (channel) |
channel
|
|
w2
|
channel (channel) |
channel
|
|
w3
|
channel (channel) |
channel
|
|
water
|
immersion (immersion) |
technique
|
|
watershed
|
segmentation method (segmentation_method) |
technique
|
|
wd
|
working distance (working_distance) |
technique
|
|
wf
|
epifluorescence (epifluorescence) |
technique
|
|
wga
|
organelle tracker (organelle_tracker) |
reagent
|
|
wide-field
|
epifluorescence (epifluorescence) |
technique
|
|
widefield
|
epifluorescence (epifluorescence) |
technique
|
|
widefield microscopy
|
epifluorescence (epifluorescence) |
technique
|
|
working-distance
|
working distance (working_distance) |
technique
|
|
x-ray ct
|
X-ray tomography (x_ray_tomography) |
technique
|
declared ambiguous with clinical imaging (technique) |
x-ray microtomography
|
X-ray tomography (x_ray_tomography) |
technique
|
|
x-ray tomo
|
X-ray tomography (x_ray_tomography) |
technique
|
|
x-ray tomogram
|
X-ray tomography (x_ray_tomography) |
technique
|
|
x-ray tomography
|
X-ray tomography (x_ray_tomography) |
technique
|
|
xy
|
multipoint (multipoint) |
acquisition
|
|
xyres
|
pixel size (pixel_size) |
technique
|
|
xyz
|
multipoint (multipoint) |
acquisition
|
|
xz
|
orthogonal view (orthogonal_view) |
technique
|
|
yfp
|
fluorescent protein (fluorescent_protein) |
reagent
|
|
yokogawa_style
|
spinning disk (spinning_disk) |
technique
|
|
yz
|
orthogonal view (orthogonal_view) |
technique
|
|
z
|
z stack (z_stack) |
acquisition
|
also spelled by zscore (statistic) |
z-stack
|
z stack (z_stack) |
acquisition
|
|
z-step
|
pixel size (pixel_size) |
technique
|
|
zs
|
z stack (z_stack) |
acquisition
|
|
zseries
|
z stack (z_stack) |
acquisition
|
|
zstack
|
z stack (z_stack) |
acquisition
|
|
zstep
|
pixel size (pixel_size) |
technique
|
|